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Visualizing Diffusion Tensor Images of the Mouse Spinal Cord

机译:可视化小鼠脊髓的扩散张量图像

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摘要

Within biological systems water molecules undergo continuous stochastic Brownian motion. The rate of this diffusion can give clues to the structure of underlying tissues. In some tissues the rate is anisotropic - faster in some directions than others. Diffusion-rate images are second-order tensor fields and can be calculated from diffusion-weighted magnetic resonance images. A 2D diffusion tensor image (DTI) and an associated anatomical scalar field, created during the tensor calculation, define seven dependent values at each spatial location. Understanding the interrelationships among these values is necessary to understand the data. We present two new methods for visually representing DTIs. The first method displays an array of ellipsoids where the shape of each ellipsoid represents one tensor value. The novel aspect of this representation is that the ellipsoids are all normalized to approximately the same size so that they can be displayed in context. The second method uses concepts from oil painting to represent the seven-valued data with multiple layers of varying brush strokes. Both methods successfully display most or all of the information in DTIs and provide exploratory methods for understanding them. The ellipsoid method has a simpler interpretation and explanation than the painting-motivated method; the painting-motivated method displays more of the information and is easier to read quantitatively. We demonstrate the methods on images of the mouse spinal cord. The visualizations show significant differences between spinal cords from mice suffering from Experimental Allergic Encephalomyelitis (EAE) and spinal cords from wild-type mice. The differences are consistent with pathology differences shown histologically and suggest that our new non-invasive imaging methodology and visualization of the results could have early diagnostic value for neurodegenerative diseases.
机译:在生物系统中,水分子经历连续的随机布朗运动。这种扩散的速度可以为基础组织的结构提供线索。在某些组织中,该速率是各向异性的-在某些方向上比其他方向更快。扩散率图像是二阶张量场,可以根据扩散加权磁共振图像进行计算。在张量计算期间创建的2D扩散张量图像(DTI)和相关的解剖学标量场在每个空间位置定义了七个相关值。了解这些值之间的相互关系对于理解数据是必要的。我们提出了两种可视化表示DTI的新方法。第一种方法显示一个椭球阵列,其中每个椭球的形状代表一个张量值。这种表示的新颖之处在于,所有椭球都被标准化为大致相同的大小,因此可以在上下文中显示它们。第二种方法使用油画中的概念来表示具有多层不同笔触的七值数据。两种方法都可以成功显示DTI中的大部分或全部信息,并提供用于理解它们的探索性方法。椭圆法比绘画动机法具有更简单的解释和解释。以绘画为动力的方法可以显示更多信息,并且更易于定量阅读。我们展示了小鼠脊髓图像上的方法。可视化结果显示,患有实验性变应性脑脊髓炎(EAE)的小鼠的脊髓与野生型小鼠的脊髓之间存在显着差异。这种差异与组织学上显示的病理差异是一致的,这表明我们新的非侵入性成像方法和结果可视化对神经退行性疾病具有早期诊断价值。

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